| Curriculum | Exercise | Answer Key | Last Update | Last Review |
|---|---|---|---|---|
| An Introduction to NCBI BLAST | Webpage | Answer Key | 12/27/2022 | 12/27/2022 |
| Browser-Based Annotation and RNA-Seq Data | Webpage | Answer Key | 12/29/2022 | 12/29/2022 |
| Detecting and Interpreting Genetic Homology | Webpage | Answer Key | 12/29/2022 | 12/29/2022 |
| Introduction to BLAST using Human Leptin | Webpage | Answer Key | 01/06/2023 | 01/06/2023 |
| Simple Annotation Problem | Webpage | Answer Key | 12/27/2022 | 12/27/2022 |
| TSS Module Primer: Review of Transcription, Promoter Structure, and Chromatin Packaging | Webpage | Answer Key | 12/30/2022 | 12/30/2022 |
| TSS Module 1: Transcription Start Sites Introduction | Webpage | Answer Key | 01/12/2023 | 01/12/2023 |
| TSS Module 2: Using Sequence Alignment to Identify a TSS | Webpage | Answer Key | 12/30/2022 | 12/30/2022 |
| TSS Module 3: CAGE, RAMPAGE, and RNA Pol II X-ChIP-Seq | Webpage | Answer Key | 12/31/2022 | 12/31/2022 |
| TSS Module 4: Annotation of Broad Transcription Start Sites | Webpage | Answer Key | 12/31/2022 | 12/31/2022 |
| Understanding Eukaryotic Genes: Module 1. Introduction to the Genome Browser: What is a gene? | Webpage | Answer Key | 12/31/2022 | 12/31/2022 |
| Understanding Eukaryotic Genes: Module 2. Transcription, Part I: From DNA sequence to transcription unit | Webpage | Answer Key | 08/31/2022 | 01/02/2023 |
| Understanding Eukaryotic Genes: Module 3. Transcription, Part II: What happens to the initial transcript made by RNA pol II? | Webpage | Answer Key | 12/31/2022 | 12/31/2022 |
| Understanding Eukaryotic Genes: Module 4. Removal of introns from pre-mRNA by splicing | Webpage | Answer Key | 12/29/2022 | 12/29/2022 |
| Understanding Eukaryotic Genes: Module 5. Translation: The need for an Open Reading Frame | Webpage | Answer Key | 12/31/2022 | 12/31/2022 |
| Understanding Eukaryotic Genes: Module 6. Alternative splicing | Webpage | Answer Key | 01/11/2023 | 01/11/2023 |
| Using mRNA and EST Evidence in Annotation | Webpage | Answer Key | 12/29/2022 | 12/29/2022 |
| Curriculum | Exercise | Last Update | Last Review |
|---|---|---|---|
| About Synteny Analysis | Webpage | 12/24/2022 | 12/24/2022 |
| Annotation Instruction Sheet | Webpage | 12/26/2022 | 12/26/2022 |
| Annotation of a Drosophila Gene | Webpage | 12/28/2022 | 12/28/2022 |
| Annotation of Transcription Start Sites in Drosophila | Webpage | 01/03/2023 | 01/03/2023 |
| Annotation Strategy Guide | Webpage | 01/06/2023 | 01/06/2023 |
| Detecting and Interpreting Genetic Homology: Lecture Notes on Alignment | Webpage | 12/23/2021 | 12/27/2022 |
| Drosophila Annotation Goals: Final Presentation and Written Reports | Webpage | 05/16/2021 | 12/26/2022 |
| From Smith-Waterman to BLAST | Webpage | 12/25/2022 | 12/25/2022 |
| Introduction to Motifs and Motif Finding | Webpage | 07/29/2014 | 12/26/2022 |
| List of Common Bioinformatics Programs | Webpage | 01/04/2023 | 01/04/2023 |
| Parasitoid Wasps Project: Annotation Walkthrough | Webpage | 11/10/2021 | 11/10/2021 |
| Pathways Project: Annotation Walkthrough | Webpage | 01/06/2023 | 01/06/2023 |
| Pathways Project: Reference Glossary | Webpage | 08/24/2022 | 08/24/2022 |
| Quick Check of Student Annotations | Webpage | 12/26/2022 | 12/26/2022 |
| RNA Quantitation from RNA-Seq Data | Webpage | 12/25/2022 | 12/25/2022 |
| Understanding Eukaryotic Genes: Glossary | Webpage | 08/06/2021 | 12/31/2022 |
| Curriculum | Exercise | Answer Key | Last Update | Last Review |
|---|---|---|---|---|
| Behavior and Limitations of Motif Finding | Webpage | Answer Key | 12/24/2021 | 12/24/2021 |
| Curriculum | Exercise | Last Update | Last Review |
|---|---|---|---|
| Annotation of Conserved Motifs in Drosophila | Webpage | 12/26/2021 | 12/26/2021 |
| Chimp BAC Analysis: Genes and Pseudogene | Webpage | 12/23/2021 | 12/23/2021 |
| GenBank Accession Number Reference Sheet | Webpage | 12/20/2021 | 12/20/2021 |
| Guidelines for your Chimp Chunks Report | Webpage | 08/11/2021 | 12/21/2021 |
| Motif Discovery in Drosophila | Webpage | 12/27/2021 | 12/27/2021 |
| Using FlyBase RNA-Seq Tools to Investigate Gene Expression Profiles | Webpage | 12/28/2021 | 12/28/2021 |